1/*
2 Copyright(C) 2005
3 All Rights Reserved. Salih Yurttas, ZCubes, BitsOfCode Software Systems, Inc..
4
5 Permission to use, copy, modify, and distribute this
6 software and its documentation for EDUCATIONAL purposes
7 and without fee is hereby granted provided that this
8 copyright notice appears in all copies.
9
10 date : September 1, 2005.
11 author : Salih Yurttas.
12
13 mmap_10.cpp
14*/
15
16#include <iostream>
17
18#include <vector>
19#include <string>
20
21#include <map>
22
23using namespace std;
24
25int main(int argc, char* argv[]) {
26
27 const int N_SEQS= 4;
28
29 string d_list[] = {"AGGCTAAT",
30 "GGCTAATA",
31 "TGTAAATT",
32 "ACGAGGCT"};
33
34 vector<string> dna_list(d_list,
35 d_list+N_SEQS);
36
37 vector< vector<int> > counts_positions_list;
38
39 vector<int> v;
40
41 v.push_back(2);
42 v.push_back(5);
43 v.push_back(8);
44
45 counts_positions_list.push_back(v);
46
47 v.clear();
48
49 v.push_back(2);
50 v.push_back(4);
51 v.push_back(7);
52
53 counts_positions_list.push_back(v);
54
55 v.clear();
56
57 v.push_back(4);
58 v.push_back(1);
59 v.push_back(3);
60 v.push_back(7);
61 v.push_back(8);
62
63 counts_positions_list.push_back(v);
64
65 v.clear();
66
67 v.push_back(1);
68 v.push_back(8);
69
70 counts_positions_list.push_back(v);
71
72 v.clear();
73
74 for(int i=0; i<N_SEQS; ++i) {
75 cout << dna_list.at(i) << " - ";
76 int m = counts_positions_list.at(i).at(0);
77 cout << m << " ";
78 for(int j=1; j<m; ++j)
79 cout << counts_positions_list.at(i).at(j) << ",";
80 cout << counts_positions_list.at(i).at(m) << endl;
81 }
82
83}